Research
The cnidarian-bilaterian ancestor possessed at least 56 homeoboxes: evidence from the starlet sea anemone, Nematostella vectensis
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* Corresponding author: John R Finnerty jrf3@bu.edu
1 Bioinformatics Program, Boston University, Cummington Street, Boston, MA 02215, USA
2 National Human Genome Research Institute, Fishers Lane, Bethesda, MD 20892, USA
3 Department of Biology, Boston University, Cummington Street, Boston, MA 02215, USA
Genome Biology 2006, 7:R64 doi:10.1186/gb-2006-7-7-r64
Published: 24 July 2006Additional files
Additional data file 1:
Accession numbers and phylogenetic affinities are provided for each sequence, including the degree of statistical support for each homeodomain's phylogenetic position on both the neighbor-joining and Bayesian trees.
Format: PDF Size: 117KB Download file
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Additional data file 2:
Neighbor-joining phylogeny depicting the relationships among 455 distinct homeodomain sequences (130 from Nematostella, 97 from Drosophila, and 228 from human).
Format: PDF Size: 61KB Download file
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Additional data file 3:
Bayesian phylogeny depicting the relationships among the same 455 homeodomain sequences.
Format: PDF Size: 55KB Download file
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Additional data file 4:
Perl script that was used to parse BLAST reports and extract homeodomains from corresponding FASTA files.
Format: GZ Size: 553KB Download file
Additional data file 5:
Phylogenetic dataset used in this study in nexus format.
Format: NEX Size: 53KB Download file