Phylogenetically widespread alternative splicing at unusual GYNGYN donors

Michael Hiller¹ , Klaus Huse² , Karol Szafranski² , Philip Rosenstiel³^,4 , Stefan Schreiber³ , Rolf Backofen¹ and Matthias Platzer²

¹Institute of Computer Science, Chair for Bioinformatics, Albert-Ludwigs-University Freiburg, Georges-Koehler-Allee 106, 79110 Freiburg, Germany

²Genome Analysis, Leibniz Institute for Age Research - Fritz Lipmann Institute, Beutenbergstr. 11, 07745 Jena, Germany

³Institute of Clinical Molecular Biology, Christian-Albrechts-University Kiel, Schittenhelmstr. 12, 24105 Kiel, Germany

⁴Max Planck Institute for Molecular Genetics, Ihnestr. 63, 14195 Berlin, Germany

author email corresponding author email

Genome Biology 2006, 7:R65doi:10.1186/gb-2006-7-7-r65


Published:	25 July 2006

Subject areas: Molecular biology, Bioinformatics, Evolution

Additional files

Additional data file 1:

Data for all human confirmed GYNGYN splice donor sites identified in this study

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Additional data file 2:

Data on the strength of e and i human GYNGYN donors

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Additional data file 3:

Confirmed GYNGYN donors for seven species

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Additional data file 4:

Selected sequence traces that exemplify the experimental verification of GYNGYN donors

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Additional data file 5:

Control experiments for detecting minor splice forms by direct sequencing of RT-PCR products

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