Table 6 |
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|
NAGNAG acceptors for seven species |
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|
Species |
Number of acceptors* |
NAGNAG acceptor |
HAGHAG acceptor |
Confirmed NAGNAG acceptor |
Confirmed HAGHAG acceptor |
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|
|
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|
H. sapiens |
164,841 |
9,465 |
5.7%† |
3,530 |
37.3%‡ |
1,511 |
16%§ |
1,373 |
90.9%¶ |
|
M. musculus |
125,233 |
7,116 |
5.7% |
2,662 |
37.4% |
1,087 |
15.3% |
1,022 |
94.0% |
|
R. norvegicus |
53,598 |
3,080 |
5.7% |
1,098 |
35.6% |
215 |
7.0% |
202 |
94.0% |
|
G. gallus |
19,794 |
1,069 |
5.4% |
401 |
37.5% |
97 |
9.1% |
92 |
94.8% |
|
D. rerio |
29,067 |
1,540 |
5.3% |
484 |
31.4% |
132 |
8.6% |
118 |
89.4% |
|
D. melanogaster |
39,441 |
1,584 |
4.0% |
859 |
54.2% |
177 |
11.2% |
170 |
96.0% |
|
C. elegans |
92,867 |
4,184 |
4.5% |
2,637 |
63.0% |
33 |
0.8% |
33 |
100.0% |
|
|
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|
H stands for A, C, or T. *Total number of all unique acceptor sites annotated in RefSeq transcripts. †Number of NAGNAG acceptors/number of all acceptors. ‡Number of HAGHAG acceptors/number of NAGNAG acceptors. §number of confirmed NAGNAG acceptors/number of NAGNAG acceptors. ¶Number of confirmed HAGHAG acceptors/number of confirmed NAGNAG acceptors. |
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|
Hiller et al. Genome Biology 2006 7:R65 doi:10.1186/gb-2006-7-7-r65 |
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