Table 2 |
||
|
False-positive and false-negative rates of peptide identifications in liver tissue predicted by PeptideProphet at different probability thresholds |
||
|
Probability score cutoff |
False-negative rate |
False-positive rate |
|
|
||
|
0.99 |
0.6042 |
0.0025 |
|
0.95 |
0.4037 |
0.0099 |
|
0.90 |
0.3297 |
0.0172 |
|
0.80 |
0.2621 |
0.0304 |
|
0.70 |
0.2252 |
0.0437 |
|
0.60 |
0.1964 |
0.0593 |
|
0.50 |
0.1713 |
0.0787 |
|
0.40 |
0.1440 |
0.1091 |
|
0.30 |
0.1262 |
0.1364 |
|
0.20 |
0.1041 |
0.1877 |
|
0.10 |
0.0724 |
0.3010 |
|
0.00 |
0.0000 |
0.9295 |
|
|
||
|
Zhang et al. Genome Biology 2006 7:R73 doi:10.1186/gb-2006-7-8-r73 |
||
