Table 3 |
||||||
|
Number of unique N-linked glycosites and percentage of sites from intracellular or extracellular proteins using different peptide probability thresholds |
||||||
|
Probability threshold |
Database |
|||||
|
|
||||||
|
≥0.5 |
≥0.8 |
≥0.9 |
≥0.95 |
≥0.99 |
||
|
|
||||||
|
Number of unique N-linked glycosites |
5202 |
2870 |
2265 |
1895 |
1522 |
52442 |
|
Number of unique N-linked glycosites from intracellular proteins |
2207 |
817 |
363 |
264 |
124 |
32770 |
|
Number of unique N-linked glycosites from secreted proteins |
1326 |
1086 |
1011 |
946 |
834 |
7195 |
|
Number of unique N-linked glycosites from transmembrane proteins |
976 |
523 |
408 |
337 |
263 |
10359 |
|
Number of unique N-linked glycosites from cell surface proteins |
633 |
444 |
383 |
348 |
301 |
5138 |
|
Number of unique N-linked glycosites from all extracellular proteins |
2935 |
2053 |
1802 |
1631 |
1398 |
22692 |
|
|
||||||
|
Zhang et al. Genome Biology 2006 7:R73 doi:10.1186/gb-2006-7-8-r73 |
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