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Codon usage patterns in Nematoda: analysis based on over 25 million codons in thirty-two species

Makedonka Mitreva^*, Michael C Wendl, John Martin, Todd Wylie, Yong Yin, Allan Larson, John Parkinson, Robert H Waterston and James P McCarter

* Corresponding author: Makedonka Mitreva mmitreva@watson.wustl.edu

Genome Biology 2006, 7:R75 doi:10.1186/gb-2006-7-8-r75

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Molecular determinants archetypical to the phylum Nematoda

Yong Yin, John Martin, Sahar Abubucker, Zhengyuan Wang, Lucjan Wyrwicz, Leszek Rychlewski, James P McCarter, Richard K Wilson, Makedonka Mitreva BMC Genomics 2009, 10:114 (18 March 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Systematic analysis of insertions and deletions specific to nematode proteins and their proposed functional and evolutionary relevance

Zhengyuan Wang, John Martin, Sahar Abubucker, Yong Yin, Robin B Gasser, Makedonka Mitreva BMC Evolutionary Biology 2009, 9:23 (28 January 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Evolution of GHF5 endoglucanase gene structure in plant-parasitic nematodes: no evidence for an early domain shuffling event

Tina Kyndt, Annelies Haegeman, Godelieve Gheysen BMC Evolutionary Biology 2008, 8:305 (3 November 2008)

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A transcriptomic analysis of the adult stage of the bovine lungworm, Dictyocaulus viviparus

Shoba Ranganathan, Shivashankar H Nagaraj, Min Hu, Christina Strube, Thomas Schnieder, Robin B Gasser BMC Genomics 2007, 8:311 (5 September 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Gender-specific selection on codon usage in plant genomes

Carrie-Ann Whittle, Meghna R Malik, Joan E Krochko BMC Genomics 2007, 8:169 (13 June 2007)

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