Table 1

Summary of sequences used by nematode species

Clade
Code
Species
ESTs
Total number of clusters
Clusters or genes used
Codons
GC content (%)













n
%



V
NA
Necator americanusa
4,766
2,294
1,784
78
192,756
46

AC
Ancylostoma caninumb
9,079
4,203
3,207
76
305,036
48

AY
Ancylostoma ceylanicumb
10,544
3,485
2,814
81
387,372
49

NB
Nippostrongylus brasiliensisb
1,234
742
630
85
75,934
50

HC
Haemonchus contortusb
17,268
4,146
4,102
99
584,513
47

OO
Ostertagia ostertagib
6,670
2,355
1,961
83
222,616
48

TD
Teladorsagia circumcinctab
4,313
1,655
1,616
98
194,351
48

CE
Caenorhabditis elegansc
-
-
22,254
100
9,784,215
43

CB
Caenorhabditis briggsaec
-
-
19,528
100
8,007,053
44

PP
Pristionchus pacificusc
8,672
3,690
2,597
70
297,605
51
IVa
SS
Strongyloides stercoralisa
11,236
3,635
2,803
77
367,308
33

SR
Strongyloides rattib
9,932
3,264
2,682
82
320,874
32

PT
Parastrongyloides trichosurib
7,712
3,086
2,457
80
284,785
40
IVb
PE
Pratylenchus penetransd
1,908
408
338
83
45,802
46

GP
Globodera pallidad
1,317
977
479
49
65,699
51

GR
Globodera rostochiensisd
5,905
2,851
2,192
77
290,614
51

HG
Heterodera glycinesd
18,524
7,198
5,564
77
742,990
50

MI
Meloidogyne incognitad
12,394
4,408
3,214
73
366,435
37

MJ
Meloidogyne javanicad
5,282
2,609
2,086
80
203,135
36

MA
Meloidogyne arenariad
3,251
1,892
1,483
78
176,816
36

MH
Meloidogyne haplad
13,462
4,479
3,507
78
407,985
36

MC
Meloidogyne chitwoodid
7,036
2,409
1,906
79
205,612
35

ZP
Zeldia punctatac
388
208
102
49
16,723
43
III
AS
Ascaris suumb
38,944
8,482
5,830
69
646,740
46

AL
Ascaris lumbricoidesa
1,822
853
508
60
42,919
47

TC
Toxocara canisb
4,206
1,447
866
60
103,065
48

BM
Brugia malayia
25,067
9,511
6,483
68
561,296
39

DI
Dirofiliaria immitisb
3,585
1,747
1,380
79
126,880
38

OV
Onchocerca volvulusa
14,922
5,097
2,914
57
299,336
40
I
TS
Trichinella spiralisa
10,384
3,680
2,693
73
290,794
41

TM
Trichuris murisb
2,713
1,577
1,179
75
147,995
49

TV
Trichuris vulpisb
2,958
1,257
1,000
80
106,071
48

aHuman parasite, banimal parasite, cfree-living, and dplant parasite. EST, expressed sequence tag.

Mitreva et al. Genome Biology 2006 7:R75   doi:10.1186/gb-2006-7-8-r75