Table 6 |
||||
|
Microarray design |
||||
|
Total number of probes |
Total number of genes |
Probes detected |
Genes detected |
|
|
|
||||
|
Singletons 1 probe |
12,912* |
12,912 |
8,265 |
8,265 |
|
Singletons >1 probe |
82 |
37 |
45 |
27 |
|
Gene families |
566 |
177 |
436 |
162 |
|
Alternative transcripts |
7,207 |
2,768 |
5,128 |
2,479 |
|
Negative controls |
503 |
5 |
- |
- |
|
Agilent controls |
1304 |
- |
- |
- |
|
Total |
22,574 |
15,894 |
13,874 |
10,933 |
|
|
||||
|
The total number of probes and genes in each of the main categories, as well as the number of probes and genes detected in our experiment, are shown. *One singleton probe (of the same sequence) was printed in two duplicate spots. |
||||
|
McIntyre et al. Genome Biology 2006 7:R79 doi:10.1186/gb-2006-7-8-r79 |
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