Genome Biology

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This article is part of the supplement: EGASP '05: ENCODE Genome Annotation Assessment Project

Open Access

Automatic annotation of eukaryotic genes, pseudogenes and promoters

Victor Solovyev*, Peter Kosarev, Igor Seledsov and Denis Vorobyev

Genome Biology 2006, 7(Suppl 1):S10 doi:10.1186/gb-2006-7-s1-s10

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A comparison study on feature selection of DNA structural properties for promoter prediction

Yanglan Gan, Jihong Guan, Shuigeng Zhou BMC Bioinformatics 2012, 13:4 (7 January 2012)

Methodology article   Open Access

Reranking candidate gene models with cross-species comparison for improved gene prediction

Qian Liu, Koby Crammer, Fernando CN Pereira, David S Roos BMC Bioinformatics 2008, 9:433 (14 October 2008)

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EGASP: the human ENCODE Genome Annotation Assessment Project

Roderic Guigó, Paul Flicek, Josep F Abril, Alexandre Reymond, Julien Lagarde, France Denoeud, Stylianos Antonarakis, Michael Ashburner, Vladimir B Bajic, Ewan Birney, Robert Castelo, Eduardo Eyras, Catherine Ucla, Thomas R Gingeras, Jennifer Harrow, Tim Hubbard, Suzanna E Lewis, Martin G Reese Genome Biology 2006, 7(Suppl 1):S2 (7 August 2006)