Table 1

Separation of 184 pseudogenes in ENCODE regions identified in this study

Final pseudogene type*

Detected only by routine P

Detected by both routines

Detected only by routine D


Processed

60

30

3

Non-processed

Duplicated

3

13

3

Fragment

60

1

11


*The types are the final classification after information from routines P and D was combined. They could be different from a pseudogene's initial type labeled in either routine P or D. In routine P, two were annotated as processed and two as fragments and another four were identified partially.

Zheng and Gerstein Genome Biology 2006 7(Suppl 1):S13   doi:10.1186/gb-2006-7-s1-s13

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