Table 3

Examples of known pseudogenes in ENCODE regions

Name

Region

Pseudogene location

Our annotation

GENCODE annotation


β-globin

ENm009

488570-490726 (-)

489920-490351 (-)

488931-490348 (-)

α-globin

ENm008

156150-156704 (+)

NA

NA

α-globin

ENm008

158635-159503 (+)

158920-159084 (+)

158678-159333 (+)

ζ-globin

ENm008

152711-155400 (+)

NA

153121-155155 (+)

OR51H2P

ENm009

123369-124314 (+)

123353-124305 (+)

123368-124273 (+)

OR51B8P

ENm009

577399-578156 (-)

577369-578174 (-)

577403-578171 (-)


NA, not annotated.

Zheng and Gerstein Genome Biology 2006 7(Suppl 1):S13   doi:10.1186/gb-2006-7-s1-s13

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