Table 1 |
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|
Analysis of RefSeq and ENSEMBL ENCODE annotation compared with GENCODE |
||
|
RefSeq |
ENSEMBL |
|
|
|
||
|
No. (unique) exons |
3,984 |
4,734 |
|
No. transcripts |
577 |
738 |
|
No. exons overlapping GENCODE exons (%) |
5,118 (98.6%) |
4,469 (94.4%) |
|
No. transcripts overlapping GENCODE (%) |
567 (98.3%) |
675 (91.5%) |
|
No. GENCODE exons overlapped (total = 8,865) (%) |
7,084 (80.0%) |
7,450 (84.0%) |
|
No. GENCODE transcripts overlapped (total = 2,608) (%) |
2,327 (89.2%) |
2,395 (91.8%) |
|
|
||
|
Harrow et al. Genome Biology 2006 7(Suppl 1):S4 doi:10.1186/gb-2006-7-s1-s4 |
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