The computational gene finding pipeline UMIAGS (University of Maryland Integrative Analysis of Gene Structure). The raw genomic sequence is shown as an input at left; gene structure predictions are emitted at right. Additional evidence tracks for the combiner program JIGSAW are shown entering from the bottom. See text for details. GHMM, generalized hidden Markov model.
Allen et al. Genome Biology 2006 7(Suppl 1):S9 doi:10.1186/gb-2006-7-s1-s9