|
Accuracy of coding exon prediction by Fgenesh++ pipeline |
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| All genes, Sn/Sp (%) |
mRNA supported, Sp (%) |
Protein supported, Sp (%) |
Ab initio, Sp (%) |
|
|
|
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| Nucleotide level |
93.00/79.54 |
94.19 |
86.64 |
13.98 |
| CDS EXACT |
78.42/74.18 |
90.20 |
84.28 |
7.85 |
| CDS 1EDGE |
91.55/78.51 |
95.00 |
88.77 |
10.47 |
| CDS OVERLAP |
92.31/78.85 |
95.53 |
89.02 |
10.74 |
|
CDS is considered to be predicted correctly if: both CDS coordinates are predicted correctly (CDS EXACT); at least one CDS edge is predicted correctly (CDS 1EDGE);or predicted CDS overlaps with known CDS (CDS OVERLAP). | ||||
Solovyev et al. Genome Biology 2006 7(Suppl 1):S10 doi:10.1186/gb-2006-7-s1-s10 |
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