Table 6

Accuracy of gene prediction using similar Drosophila proteins

Sn ex
 Sno ex
 Sp ex
 Sn nuc
 Sp nuc
 CC
 %CG
Similarity of Drosophila protein >80% in 66 sequences
     Fgenesh
 90.5
 93.8
 95.1
 97.9
 96.9
 0.950
 55
     Genewise
 79.3
 83.9
 86.8
 97.3
 99.5
 0.985
 23
     Fgenesh+
 95.1
 97.8
 97.0
 98.9
 99.5
 0.9914
 70
     Prot_map
 86.4
 95.3
 88.1
 97.6
 99.0
 0.982
 41
60% < similarity of Drosophila protein <80% in 290 sequences
     Fgenesh
 88.6
 93.1
 90.8
 94.9
 93.8
 0.941
 34
     Genewise
 76.3
 91.8
 82.9
 92.8
 99.4
 0.959
 7
     Fgenesh+
 89.2
 94.4
 92.7
 95.5
 98.5
 0.968
 44
     Prot_map
 75.1
 92.5
 74.9
 91.4
 97.5
 0.941
 10

Solovyev et al. Genome Biology 2006 7(Suppl 1):S10   doi:10.1186/gb-2006-7-s1-s10