Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment

Vladimir B Bajic¹ , Michael R Brent², Randall H Brown², Adam Frankish³, Jennifer Harrow⁴, Uwe Ohler⁵, Victor V Solovyev⁶ and Sin Lam Tan⁷

¹South African National Bioinformatics Institute (SANBI), University of the Western Cape, Bellville 7535, South Africa

²Laboratory for Computational Genomics and Department of Computer Science, Washington University in St Louis, USA

³Human and Vertebrate Analysis and Annotation Group, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK

⁴Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1HH, UK

⁵Institute for Genome Sciences and Policy, Science Dr, Duke University, Durham, NC 27708, USA

⁶Royal Holloway, University of London, London, UK

⁷Knowledge Extraction Lab, Institute for Infocomm Research, Heng Mui Keng Terrace, Singapore 119613