Table 1 |
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|
Prediction accuracy measures of mRNA/EST evidence based gene prediction methods |
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| Name |
NSn |
NSp |
ESn |
ESp |
ExT |
TSn |
TSp |
TrG |
GSn |
GSp |
|
|
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| Pairagon + N-SCAN_EST |
87.6 |
92.8 |
76.6 |
89.0 |
7.2 |
39.3 |
60.6 |
1.3 |
69.6 |
61.7 |
| ENSEMBL |
90.2 |
92.0 |
77.5 |
82.7 |
7.8 |
39.8 |
54.6 |
1.5 |
71.6 |
67.3 |
| ExoGean |
84.2 |
94.3 |
79.3 |
83.5 |
9.8 |
42.5 |
52.4 |
2.3 |
63.2 |
80.8 |
|
|
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|
The highest value for each measure is in bold. The columns are Nucleotide sensitivity (NSn) and specificity (NSp), Exon sensitivity (ESn) and specificity (ESp), Exons per transcript (ExT), Transcript sensitivity (TSn) and specificity (TSp), Transcripts per gene (TrG), and Gene sensitivity (GSn) and specificity (GSp). |
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|
Arumugam et al. Genome Biology 2006 7(Suppl 1):S5 doi:10.1186/gb-2006-7-s1-s5 |
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