Table 2 |
|||||
|
Genes that are differentially expressed in favorable vs unfavorable neuroblastoma |
|||||
| Favorable NB > unfavorable NB |
NBGS |
Favorable NB < unfavorable NB |
NBGS |
||
|
|
|||||
| neuroblast < favorable NB |
neuroblast < favorable NB, neuroblast < unfavorable NB |
||||
|
|
|
||||
| AKAP7 |
6q |
- |
FABP6 |
5q |
- |
| ARL4C |
2q |
- |
IGLJ3 |
22q |
1 |
| ASPN |
9q |
- |
NEFL |
8p |
- |
| BCL2 |
18q |
1 |
NPY |
7p |
- |
|
|
|||||
| CALB1 |
8q |
- |
neuroblast < unfavorable NB |
||
|
|
|||||
| CAMK2B |
22q |
2 |
ALK |
2p |
- |
| CD24 |
6q |
- |
ASCL1 |
12q |
1 |
| CDC42 |
1p |
1 |
BCL11A |
2p |
- |
| DDAH1 |
1p |
- |
BIRC5 |
17q |
3 |
| DNAPTP6 |
2q |
- |
C3 |
19p |
- |
| EPB41L3 |
18p |
1 |
CALCB |
11p |
- |
| FAM70A |
Xq |
- |
CCL18 |
17q |
- |
| KIFAP3 |
1q |
1 |
CCL21 |
9p |
- |
| OPHN1 |
Xq |
- |
CCNB1 |
5q |
1 |
| PPAN |
19p |
- |
CD74 |
5q |
- |
| PRKCB1 |
16p |
1 |
CRH |
8q |
- |
| REEP1 |
2p |
- |
CSPG3 |
19p |
- |
| RGS7 |
1q |
2 |
CXCR4 |
2q |
2 |
| RNF11 |
1p |
- |
DYNC1I1 |
7q |
- |
| SCD5 |
4q |
2 |
F12 |
5q |
- |
| SERINC1 |
6q |
1 |
GFRA2 |
8p |
- |
| ST6GALNAC5 |
1p |
- |
IGHA1 |
14q |
2 |
| SV2C |
5q |
- |
IGHG3 |
14q |
- |
|
|
|||||
| neuroblast > favorable NB, neuroblast > unfavorable NB |
IGHM |
14q |
- |
||
|
|
|||||
| CACNA2D3 |
3p |
- |
IGKC |
2p |
1 |
| DLK1 |
14q |
2 |
IGLC1 |
22q |
- |
| HBG1 |
11p |
- |
IGLC2 |
22q |
- |
| HBG2 |
11p |
- |
LMO3 |
12p |
1 |
|
|
|||||
| neuroblast > unfavorable NB |
MMP9 |
20q |
1 |
||
|
|
|||||
| ALDH3A2 |
17p |
1 |
MYCN |
2p |
9 |
| DBH |
9q |
1 |
NEFH |
22q |
- |
| DLC1 |
8p |
- |
ODC1 |
2p |
3 |
| EYA1 |
8q |
- |
OGDHL |
10q |
- |
| GCH1 |
14q |
1 |
P2RX5 |
17p |
- |
| HBA1 |
16p |
- |
PRAME |
22q |
1 |
| HBA2 |
16p |
- |
RPS4Y1 |
Yp |
1 |
| NTRK1 |
1q |
4 |
SERPINF1 |
17p |
- |
| PTPRD |
9p |
- |
SIX3 |
2p |
- |
| PTPRK |
6q |
- |
SST |
3q |
1 |
| SFRP1 |
8p |
1 |
TNFRSF10B |
8p |
2 |
| SLC18A1 |
8p |
- |
TWIST1 |
7p |
1 |
| TFAP2B |
6p |
- |
XAGE1 |
Xp |
- |
|
|
|||||
| TLN2 |
15q |
1 |
neuroblast > favorable NB |
||
|
|
|||||
| RNU2 |
17q |
- |
|||
|
|
|||||
| neuroblast > favorable NB, neuroblast > unfavorable NB |
|||||
|
|
|||||
| C11orf43 |
11p |
- |
|||
|
|
|||||
|
Genes that are differentially expressed compared with neuroblasts among the differentially expressed genes in favorable neuroblastoma (NB) vs unfavorable NB, with an indication of the number of neuroblastoma microarray studies in which these genes were found through NBGS analysis. NBGS, Neuroblastoma Gene Server. |
|||||
|
De Preter et al. Genome Biology 2007 8:401 doi:10.1186/gb-2007-8-1-401 |
|||||