Table 1

Initial evaluation

Predicted gene set
Number of gene models
Number of perfect alignments/weighted by number of gene models
Number present/weighted by number of gene models

GLEAN
10,157
111/0.011
356/0.035
Fgenesh
32,664
100/0.003
385/0.012
NCBI
9,759
88/0.009
340/0.035
Evolutionary Conserved Core
10,966
39/0.004
284/0.026
Ensembl
27,755
32/0.0012
217/0.008
Drosophila Ortholog
8,878
4/0.0005
116/0.013

Elsik et al. Genome Biology 2007 8:R13   doi:10.1186/gb-2007-8-1-r13