PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
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* Corresponding author: Wyeth W Wasserman wyeth@cmmt.ubc.ca
- † Equal contributors
Genome Biology 2007, 8:R207 doi:10.1186/gb-2007-8-10-r207
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BioMed Central: 4 citations
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Review
Identification of cis-regulatory sequence variations in individual genome sequences Rebecca Worsley-Hunt, Virginie Bernard, Wyeth W Wasserman Genome Medicine 2011, 3:65 (10 October 2011) Wasserman and colleagues review existing methods and software for predicting the impact of cis-regulatory mutations on disease gene transcription and RNA processing.
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Research article
Identification of a set of genes showing regionally enriched expression in the mouse brain Cletus A D'Souza, Vikramjit Chopra, Richard Varhol, Yuan-Yun Xie, Slavita Bohacec, Yongjun Zhao, Lisa LC Lee, Mikhail Bilenky, Elodie Portales-Casamar, An He, Wyeth W Wasserman, Daniel Goldowitz, Marco A Marra, Robert A Holt, Elizabeth M Simpson, Steven JM Jones BMC Neuroscience 2008, 9:66 (14 July 2008) |
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Method
Peter Van Loo, Stein Aerts, Bernard Thienpont, Bart De Moor, Yves Moreau, Peter Marynen Genome Biology 2008, 9:R66 (7 April 2008) ModuleMiner detects |
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Research
Text-mining assisted regulatory annotation Stein Aerts, Maximilian Haeussler, Steven van Vooren, Obi L Griffith, Paco Hulpiau, Steven JM Jones, Stephen B Montgomery, Casey M Bergman, Genome Biology 2008, 9:R31 (13 February 2008) Text-mining technologies can be integrated with genome annotation systems, increasing the availability of annotated |