Table 1

PAZAR database content on 13 July 2007*

Project
Regulated genes
Regulatory sequence (genomic)
Regulatory sequence (artificial)
Transcription factors
Transcription factor profiles
Annotated publications

ABS
205
611
-
152
-
110
ARE project
14
14
-
2
-
15
JASPAR core
-
-
3,229
84
123
94
Liver set
14
62
-
-
-
-
MUC5AC
2
23
-
13
-
9
Muscle set
15
49
-
-
-
-
ORegAnno
256
690
-
115
-
305
ORegAnno Erythroid
8
33
-
1
-
1
ORegAnno STAT1 lit
28
37
-
1
-
29
Pleiades genes
206
810
95
177
-
409

TOTAL
748
2,329
3,324
545
123
972

*This table includes only the experimentally validated annotations available in PAZAR and, therefore, excludes the Kellis predictions.

Portales-Casamar et al. Genome Biology 2007 8:R207   doi:10.1186/gb-2007-8-10-r207