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Resolution: standard / high Figure 3.
Association of individual miRNAs and tumor subtype or clinicopathological factors.
Shown are 31 miRNAs and three factors with at least one association at adjusted p < 0.01. Differential expression was assessed by a non-parametric Wilcoxon rank sum
test for comparison between two groups or a non-parametric Kruskal-Wallis test for
comparison between multiple groups. To address the issue of multiple testing for the
same factor, p values were adjusted by Benjamini and Hochberg's method [102]. Heatmap colors represent
relative miRNA expression as shown in the color key. The expression values for a given
sample group of interest were summarized by their mean. Brackets in the left margin
indicate members of the same miRNA family. Significance levels are shown in the right
margins: * adjusted p < 0.05; ** adjusted p < 0.01; *** adjusted p < 0.001. Abbreviations for subtype: B, basal-like; H, HER2+; LA, luminal A; LB, luminal
B; N, normal-like.
Blenkiron et al. Genome Biology 2007 8:R214 doi:10.1186/gb-2007-8-10-r214 |