Table 1 |
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|
MicroRNA/proximal probe correlations |
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|
Host gene |
Proximal probe |
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|
|
|
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|
miRNA |
Chromosome position |
Name |
Pearson correlation |
Name† |
Pearson correlation |
miRNA/probe distance (kb) |
|
|
||||||
|
miR-101 |
1p31.1 |
FLJ26232 |
0.4337 |
35.99 |
||
|
miR-30e-5p |
1p34.2 |
NFYC |
0.4950 |
17.02 |
||
|
miR-181a |
1q31.3 |
Hs.497310 |
0.4106 |
19.61 |
||
|
miR-205 |
1q32.2 |
NPC-A-5 |
0.7936 |
0.00 |
||
|
miR-10b |
2q31.1 |
HOXD10 |
0.4902 |
30.96 |
||
|
HOXD8 |
0.4472 |
18.53 |
||||
|
miR-149 |
2q37.3 |
GPC1 |
0.6567 |
11.68 |
||
|
miR-30a-3p |
6q13 |
BC040204 |
0.6406 |
16.17 |
||
|
miR-30a-5p |
6q13 |
BC040204 |
0.7091 |
16.17 |
||
|
C6orf155 |
0.4995 |
11.12 |
||||
|
miR-30c |
6q13 |
BC040204 |
0.4566 |
10.30 |
||
|
miR-106b |
7q22.1 |
MCM7 |
0.5157 |
1.02 |
||
|
miR-25 |
7q22.1 |
MCM7 |
0.4939 |
0.59 |
||
|
miR-93 |
7q22.1 |
MCM7 |
0.4988 |
0.79 |
||
|
miR-181a |
9q33.3 |
NR6A1‡ |
R08260 |
0.5913 |
1.51 |
|
|
miR-181b |
9q33.3 |
NR6A1‡ |
R08260 |
0.5634 |
2.78 |
|
|
miR-196a |
12q13.13 |
HOXC10 |
0.4914 |
1.75 |
||
|
miR-342 |
14q32.2 |
EVL |
0.7208 |
34.26 |
||
|
miR-10a |
17q21.32 |
GI_30159691 |
0.8123 |
0.40 |
||
|
HOXB6 |
0.8085 |
16.10 |
||||
|
HOXB5 |
0.7150 |
11.48 |
||||
|
HOXB3 |
0.6908 |
29.79 |
||||
|
HOXB2 |
0.7019 |
36.74 |
||||
|
HOXB4 |
0.6856 |
2.90 |
||||
|
HOXB8 |
0.5937 |
32.43 |
||||
|
miR-199a* |
19p13.2 |
DNM2‡ |
TMED1 |
0.4111 |
15.22 |
|
|
miR-99a |
21q21.1 |
C21orf34 |
0.4766 |
67.87 |
||
|
miR-155 |
21q21.3 |
BIC |
0.4688 |
0.73 |
||
|
let-7a |
22q13.31 |
FLJ27365 |
0.5272 |
1.45 |
||
|
let-7b |
22q13.31 |
FLJ27365 |
0.5732 |
2.38 |
||
|
|
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|
†Gene symbol, accession number or Illumina probe identifier. ‡Gene lies on the opposite strand. |
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|
Blenkiron et al. Genome Biology 2007 8:R214 doi:10.1186/gb-2007-8-10-r214 |
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