Table 1

Overall significance of the regulatory probability matrix at different probability thresholds

Probability threshold

Number of putative regulators

Total number of genes

Number of edges

FDR (%)


0.95

76

1,075

1,499

2.7

0.90

127

2,145

4,394

6.0

0.85

194

3,150

8,826

9.4

0.80

255

4,044

15,448

12.9


FDR, false discovery rate.

Chen et al. Genome Biology 2007 8:R219   doi:10.1186/gb-2007-8-10-r219

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