Genome Biology

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Common gene expression strategies revealed by genome-wide analysis in yeast

José García-Martínez1,2, Fernando González-Candelas3 and José E Pérez-Ortín2*

Author Affiliations

1 Sección de Chips de DNA-SCSIE, Universitat de València, Dr Moliner 50, E-46100, Burjassot, Spain

2 Departamento de Bioquímica y Biología Molecular, Universitat de València, Dr Moliner 50, E-46100, Burjassot, Spain

3 Instituto Cavanilles de Biodiversidad y Biología Evolutiva and Departamento de Genética, Universitat de València, Dr Moliner 50, E-46100, Burjassot, Spain

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Genome Biology 2007, 8:R222 doi:10.1186/gb-2007-8-10-r222

Published: 19 October 2007

Additional files

Additional data file 1:

Plot of abundance and stability for mRNA and protein molecules.

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Additional data file 2:

Clustering similar to that shown in Figure 3 but with 20 clusters.

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Additional data file 3:

Clustering similar to that shown in Figure 3 but with 30 clusters.

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Additional data file 4:

Further analysis of cluster 3 from Figure 3.

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Additional data file 5:

Further analysis of cluster 7 from Figure 3.

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Additional data file 6:

Further analysis of cluster 11 from Figure 3.

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Additional data file 7:

6VP for some other functional categories not shown in Figure 4.

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Additional data file 8:

Summary of numerical data used in the paper.

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Additional data file 9:

Ribosome biogenesis genes that appear within the low correlation class in Figure 2b.

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Additional data file 10:

Complete list of significant GO categories found in clusters from Figure 3.

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Additional data file 11:

Complete list of significant GO categories found in clusters from Additional data files 2 and 3 and not present in Figure 3

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Additional data file 12:

Standard error averages calculated for experimental (aSEe) and random sampling (aSEr) estimations for the functionally related groups from Figure 4

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Additional data file 13:

Values for the six variables of the 6,173 genes analyzed.

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Additional data file 14:

Description and comments of the data shown in additional data file 1.

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