Table 2

Profile of candidate rearrangements detected by FPP


ESP




N
 Y




No. of clones
 Agree
 Disagree
 No. of clones
 No. agree
 No. disagree
FPP alignments
 2
 11
 8
 1/2
 123
 101
 22/0

3
 0
 -
 -
 29
 22
 5/2

4
 0
 -
 -
 2
 2
 0/0

Clones are grouped in rows by the number of distinct FPP alignments. For each group, the clones are partitioned based on whether ESP detected a rearrangement. Clones in the 'Agree' column have an FPP alignment within 50 kb of both end sequence alignments. Clones in the 'Disagree' column are partitioned in the same manner as in Table 1.

Krzywinski et al. Genome Biology 2007 8:R224   doi:10.1186/gb-2007-8-10-r224