Surprising complexity of the ancestral apoptosis network

Software  

Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython

Eric Talevich, Brandon M Invergo, Peter JA Cock, Brad A Chapman BMC Bioinformatics 2012, 13:209 (21 August 2012)

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Research article  

The conservation and uniqueness of the caspase family in the basal chordate, amphioxus

Liqun Xu, Shaochun Yuan, Jun Li, Jie Ruan, Shengfeng Huang, Manyi Yang, Huiqing Huang, Shangwu Chen, Zhenghua Ren, Anlong Xu BMC Biology 2011, 9:60 (21 September 2011)

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Software  

phyloXML: XML for evolutionary biology and comparative genomics

Mira V Han, Christian M Zmasek BMC Bioinformatics 2009, 10:356 (27 October 2009)

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Research article  

The apoptotic machinery as a biological complex system: analysis of its omics and evolution, identification of candidate genes for fourteen major types of cancer, and experimental validation in CML and neuroblastoma

Cinzia Di Pietro, Marco Ragusa, Davide Barbagallo, Laura R Duro, Maria R Guglielmino, Alessandra Majorana, Rosario Angelica, Marina Scalia, Luisa Statello, Loredana Salito, Luisa Tomasello, Salvo Pernagallo, Salvo Valenti, Vito D'Agostino, Patrizio Triberio, Igor Tandurella, Giuseppe A Palumbo, Piera La Cava, Viviana Cafiso, Taschia Bertuccio, Maria Santagati, Giovanni Li Destri, Salvatore Lanzafame, Francesco Di Raimondo, Stefania Stefani, Bud Mishra, Michele Purrello BMC Medical Genomics 2009, 2:20 (30 April 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research  

Novel genes dramatically alter regulatory network topology in amphioxus

Qing Zhang, Christian M Zmasek, Larry J Dishaw, M Gail Mueller, Yuzhen Ye, Gary W Litman, Adam Godzik Genome Biology 2008, 9:R123 (4 August 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary