Table 1

Performance of the CNVfinder algorithm using validated data before wave correction

Calls


Status

Number of regions

A

B

C

D

E


Unvalidated

25

4

4

3

0

0

Validated

112

68

70

65

47

35

Total

137

72

74

68

47

35

False discovery rate

6

5

4

0

0

Sensitivity (confidence interval)

61 (51, 70)

62 (53, 72)

58 (48, 67)

42 (33, 52)

31 (23, 41)

Specificity (confidence interval)

84 (66, 95)

84 (66, 95)

88 (71, 97)

100 (90, 100)

100 (90, 100)


The number of regions called in five replicate experiments (A to E, ranked by standard deviation) using CNVfinder before wave correction. The false discovery rate, sensitivity and specificity are quoted as percentages and the confidence intervals quoted are the 95% intervals.

Marioni et al. Genome Biology 2007 8:R228   doi:10.1186/gb-2007-8-10-r228

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