Genome Biology
Volume 8
Issue 11

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Wyder S
Kriventseva EV
Schröder R
Kadowaki T
Zdobnov EM

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Kriventseva EV
Schröder R
Kadowaki T
Zdobnov EM
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Quantification of ortholog losses in insects and vertebrates

Stefan Wyder¹^,2 , Evgenia V Kriventseva³^,2 , Reinhard Schröder⁴ , Tatsuhiko Kadowaki⁵ and Evgeny M Zdobnov¹^,2^,6

¹Department of Genetic Medicine and Development, University of Geneva Medical School, 1211 Geneva, Switzerland

²Swiss Institute of Bioinformatics, rue Michel-Servet, 1211 Geneva, Switzerland

³Department of Structural Biology and Bioinformatics, University of Geneva Medical School, rue Michel-Servet, 1211 Geneva, Switzerland

⁴Interf. Institut für Zellbiologie, Abt. Genetik der Tiere, Universität Tübingen, 72076 Tübingen, Germany

⁵Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan

⁶Imperial College London, South Kensington Campus, London SW7 2AZ, UK

author email corresponding author email

Genome Biology 2007, 8:R242doi:10.1186/gb-2007-8-11-r242


Published:	16 November 2007

Subject areas: Evolution, Genome studies

Additional files

Additional data File 1:

Correlation between the absolute number of lost orthologous groups and the rate of amino acid substitutions.

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Additional data File 2:

Phylogenetic analysis of SID-1 proteins.

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Additional data File 3:

Phylogenetic analysis of CDC7 proteins.

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Additional data File 4:

GO analysis of insect-specific orthologous groups lost in all Dipterans.

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Additional data File 5:

Coeliminiation of functionally linked genes in the Diptera and Drosophila lineages.

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Additional data File 6:

Phylogenetic analysis of Fboxo7, cdk4 and cyclin D.

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Additional data File 7:

Alignment of Fboxo7 proteins.

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