Genome-wide expression profiling and bioinformatics analysis of diurnally regulated genes in the mouse prefrontal cortex

Shuzhang Yang^* , Kai Wang^* , Otto Valladares , Sridhar Hannenhalli and Maja Bucan

Department of Genetics and Penn Center for Bioinformatics, University of Pennsylvania, Philadelphia, PA 19104, USA

author email corresponding author email* Contributed equally

Genome Biology 2007, 8:R247doi:10.1186/gb-2007-8-11-r247


Published:	20 November 2007

Subject areas: Neurobiology, Physiology, Genome studies

Additional files

Additional data file 1:

Expression values at four time points for diurnally regulated genes, the clustering results from the GeneSpring software, and the gene identifiers used in our comparative analysis with five other publications.

Format: XLS Size: 1.9MB Download file

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Additional data file 2:

Heat map of expression levels for diurnal genes in 61 mouse tissues, with two-way hierarchical clustering for both the tissues and the genes. The red rectangular box around tissue names indicates brain-related tissues.

Format: TIFF Size: 13.6MB Download file

Additional data file 3:

Detailed statistics values as well as TFBS names and identifiers for TFBS enrichment analysis in the eight clusters of genes.

Format: XLS Size: 95KB Download file

This file can be viewed with: Microsoft Excel Viewer