Table 5 |
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|
Mouse loci containing TERC-like sequences |
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|
Mouse locus organization |
Orthologous rat locus organization |
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|
|
|
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|
Chromosomal localization |
Starting nucleotide of fragment homologous to 3' TERC domain (length) |
Position within TERC sequence |
No. of nucleotides complementary to sequence preceding template |
ITS length |
Chromosomal localization |
Starting nucleotide of TERC fragment (length) |
Starting nucleotide of ITS (length) |
|
|
|
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|
1 |
MMU8qA2 |
21522357 (38) |
351-388 |
0 |
213 |
RNO16q12 |
73726184 (38) |
73726146 (58) |
|
2 |
MMU13qA1 |
3475939 (54) |
331-384 |
0 |
22 |
RNO17q12 |
77825660 (53) |
77825608 (22) |
|
3 |
MMUXqC3 |
94682056 (52) |
328-377 |
7 |
25 |
RNOXq31 |
88164322 (52) |
88164265 (43) |
|
4 |
MMU5qA3 |
23908490 (37) |
357-393 |
6 |
21 |
RNO3q41 |
139145891 |
No TERC, no ITS |
|
5 |
MMU9qA5 |
47975305 (60) |
314-373 |
6 |
68 |
RNO8q23 |
51245798 |
No TERC, no ITS |
|
6 |
MMU1qC1 |
47024551 (31) |
341-374 |
3 |
57 |
RNO9q22 |
52312295 |
No TERC, no ITS |
|
7 |
MMU4qD2 |
119006678 (42) |
351-392 |
6 |
53 |
RNO5q36 |
140562692 |
No TERC, no ITS |
|
8 |
MMU10qB4 |
58505103 (118) |
271-388 |
0 |
27 |
RNO20q11 |
37230663 |
No TERC, no ITS |
|
9 |
MMU12qF1 |
106800391 (81) |
308-388 |
0 |
13 |
RNO6q32 |
136092775 |
No TERC, no ITS |
|
10 |
MMUXqA6 |
61359852 (74) |
322-395 |
6 |
23 |
RNOXq37 |
152798431 |
No TERC, no ITS |
|
11 |
MMU1qC3 |
69326421 (50) |
346-395 |
6 |
139 |
RNO9q32 |
68032617 |
No TERC, no ITS |
|
12 |
MMU10qA3 |
20387038 (98) |
289-388 |
6 |
108 |
RNO1p12 |
15780743 |
No TERC, no ITS |
|
13 |
MMU6qC1 |
68259720 (44) |
351-394 |
0 |
93 |
Not found |
- |
- |
|
14 |
MMU11qC |
86742217 (38) |
343-381 |
0 |
55 |
Not found |
- |
- |
|
|
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|
Nergadze et al. Genome Biology 2007 8:R260 doi:10.1186/gb-2007-8-12-r260 |
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