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Resolution: standard / high Figure 1.
Patterns of transcript abundance in whole-blood samples from children with KD (cohort
1). Genes and samples were organized using hierarchical clustering; each row represents
a single gene, and each column a single sample. Black indicates the median level of
expression, red indicates greater expression than the median, green less expression,
and gray missing data. Horizontal bars under the sample dendrogram at the top indicate
samples from the same individual that cluster together; open circles represent samples
obtained 1 or 2 days after IVIG treatment. Pretreatment acute KD samples are in yellow;
early post-treatment subacute samples in light blue; late post-treatment convalescent
samples in purple. Horizontal bars at the bottom of the figure indicate the sample
groups mentioned in the text. A1 and A2 are clusters of acute samples; B is a cluster
of subacute and convalescent samples. Vertical yellow bars (1 and 2) on the right
mark the two gene clusters most strongly associated with the grouping of the pretreatment
samples. The intrinsic score was graphed as a moving average of nine genes along the
y-axis. The black vertical bars on the right lettered a, b, and c mark the three gene
clusters with intrinsic scores more than 2 standard deviations away from the mean
score of 0.742.
Popper et al. Genome Biology 2007 8:R261 doi:10.1186/gb-2007-8-12-r261 |