|
Resolution: standard / high Figure 1.
Primary structures of Homer family proteins. The conserved amino-terminal EVH1-like
domain (which shows 80% sequence similarity between family members) is in yellow.
The conserved region of Homer1 (CRH1) [19] and a proline motif (P-motif, 138-Ser-Pro-Leu-Thr-Pro-142)
is specific to the mammalian Homer1 subfamily. The carboxy-terminal regions contain
coiled-coil and leucine zipper structures and show only 30% sequence similarity among
the family members. The coiled-coil regions are in orange, green and pink for the
Homer1, Homer2, and Homer3 alternatively spliced forms, respectively. The leucine
zipper structures, as predicted by Sun et al. [16], are shown as LzipA and LzipB in gray. The nomenclature is from Soloviev et al. [9], Saito et al. [10], Bottai et al. [4] and Klugmann et al. [11]. Homer3axx and Homer3bxx represent the products of four alternative splicing variants, where xx can be 00,
01, 10, or 11 to show the combination of two three-amino-acid insertions (purple)
in the coiled-coil domain, as has been suggested for the human forms [9]. Residues
involved in ligand contacts are colored light blue.
Shiraishi-Yamaguchi and Furuichi Genome Biology 2007 8:206 doi:10.1186/gb-2007-8-2-206 |