Genome Biology

official impact factor 6.89
Search for
Advanced search
Genome Biology
Tools
Open Access Highly Access

Parallel evolution of conserved non-coding elements that target a common set of developmental regulatory genes from worms to humans

Tanya Vavouri*, Klaudia Walter, Walter R Gilks, Ben Lehner† and Greg Elgar†

Genome Biology 2007, 8:R15 doi:10.1186/gb-2007-8-2-r15

Accesses  

  • Last 30 days: 70 accesses
  • Last year: 872 accesses
  • All time: 10738 accesses

Cited by

BioMed Central: 8 citations

Research article   Open Access Highly Accessed

OHMM: a Hidden Markov Model accurately predicting the occupancy of a transcription factor with a self-overlapping binding motif

Amar Drawid, Nupur Gupta, Vijayalakshmi H Nagaraj, Céline Gélinas, Anirvan M Sengupta BMC Bioinformatics 2009, 10:208 (7 July 2009)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Genome-scale identification of Caenorhabditis elegans regulatory elements by tiling-array mapping of DNase I hypersensitive sites

Baochen Shi, Xiangqian Guo, Tao Wu, Sitong Sheng, Jie Wang, Geir Skogerbø, Xiaopeng Zhu, Runsheng Chen BMC Genomics 2009, 10:92 (25 February 2009)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Genic regions of a large salamander genome contain long introns and novel genes

Jeramiah J Smith, Srikrishna Putta, Wei Zhu, Gerald M Pao, Inder M Verma, Tony Hunter, Susan V Bryant, David M Gardiner, Timothy T Harkins, S Randal Voss BMC Genomics 2009, 10:19 (13 January 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Genomic complexity of the variable region-containing chitin-binding proteins in amphioxus

Larry J Dishaw, M Gail Mueller, Natasha Gwatney, John P Cannon, Robert N Haire, Ronda T Litman, Chris T Amemiya, Tatsuya Ota, Lee Rowen, Gustavo Glusman, Gary W Litman BMC Genetics 2008, 9:78 (1 December 2008)

Abstract | Full text | PDF | PubMed

Software   Open Access Highly Accessed

Ancora: a web resource for exploring highly conserved noncoding elements and their association with developmental regulatory genes

Pär G Engström, David Fredman, Boris Lenhard Genome Biology 2008, 9:R34 (15 February 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | Editor’s summary

Ancora is a web resource that provides data and tools for exploring genomic organization of highly conserved noncoding elements for multiple genomes.

Research article   Open Access

Association of the Matrix Attachment Region Recognition Signature with coding regions in Caenorhabditis elegans

Alasdair Anthony, Mark Blaxter BMC Genomics 2007, 8:418 (15 November 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Vertebrate conserved non coding DNA regions have a high persistence length and a short persistence time

Dorota Retelska, Emmanuel Beaudoing, Cédric Notredame, C Victor Jongeneel, Philipp Bucher BMC Genomics 2007, 8:398 (31 October 2007)

Abstract | Full text | PDF | PubMed

Research   Open Access Highly Accessed

Comparative genomics using Fugu reveals insights into regulatory subfunctionalization

Adam Woolfe, Greg Elgar Genome Biology 2007, 8:R53 (11 April 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | Editor’s summary

Fish-mammal genomic alignments were used to compare over 800 conserved non-coding elements that associate with genes that have undergone fish-specific duplication and retention, revealing a pattern of element retention and loss between paralogs indicative of subfunctionalization.

Google Scholar: View citations

ISI Web of Science: View citations

PubMed Central: View citations