Methodology article  

Stratification of co-evolving genomic groups using ranked phylogenetic profiles

Shiri Freilich, Leon Goldovsky, Assaf Gottlieb, Eric Blanc, Sophia Tsoka, Christos A Ouzounis BMC Bioinformatics 2009, 10:355 (27 October 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Methodology article  

TACOA – Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach

Naryttza N Diaz, Lutz Krause, Alexander Goesmann, Karsten Niehaus, Tim W Nattkemper BMC Bioinformatics 2009, 10:56 (11 February 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article  

Horizontal Gene Transfers in prokaryotes show differential preferences for metabolic and translational genes

Aditi Kanhere, Martin Vingron BMC Evolutionary Biology 2009, 9:9 (10 January 2009)

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Database  

A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm

Sheila Podell, Terry Gaasterland, Eric E Allen BMC Bioinformatics 2008, 9:419 (7 October 2008)

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Research article  

Identification of multiple independent horizontal gene transfers into poxviruses using a comparative genomics approach

Kirsten A Bratke, Aoife McLysaght BMC Evolutionary Biology 2008, 8:67 (27 February 2008)

Abstract | Full text | PDF | PubMed | 1 comment