|
Effect of self-definition keywords on LPI scores for individual protein examples from E. coli strain K12 |
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| Self-definition keywords |
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|
|
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| K12 83333 316407 562 |
Escherichia |
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|
|
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| Query ID |
Query annotation |
Query GC% |
Match species |
LPI |
e-value |
Match species |
LPI |
e-value |
|
|
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| AAC74994 |
Cytoplasmic alpha-amylase |
49 |
Escherichia coli CFT073 |
0.993 |
0 |
Shigella dysenteriae |
0.984 |
0 |
| AAC75738 |
Carbon source regulatory protein |
49 |
Escherichia coli O157:H7 |
0.993 |
3e-26 |
Shigella flexneri |
0.984 |
3e-25 |
| AAC75802 |
Conserved hypothetical protein |
43 |
Geobacter sulfurreducens |
0.612 |
3e-138 |
Geobacter sulfurreducens |
0.610 |
3e-138 |
| AAC75097 |
UDP-galactopyranose mutase |
35 |
Psychromonas ingrahamii |
0.747 |
2e-149 |
Psychromonas ingrahamii |
0.743 |
2e-149 |
| AAC76015 |
Glycolate oxidase subunit, FAD-linked |
56 |
Escherichia coli 53638 |
0.993 |
0 |
Pseudomonas syringae |
0.745 |
0 |
Podell and Gaasterland Genome Biology 2007 8:R16 doi:10.1186/gb-2007-8-2-r16 |
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