Table 7 |
||||||
|
Effect of filter threshold setting on best match lineages for T. maritime |
||||||
| Filter threshold setting |
||||||
|
|
||||||
| 0% |
2% |
5% |
10% |
20% |
40% |
|
|
|
||||||
| Clostridia |
627 |
695 |
799 |
917 |
1,064 |
1,170 |
| Other Firmicutes |
135 |
115 |
99 |
79 |
55 |
56 |
| Non-Firmicutes bacteria |
458 |
422 |
364 |
300 |
229 |
170 |
| Archaea |
208 |
197 |
172 |
139 |
89 |
46 |
| Eukaryotes |
12 |
11 |
7 |
6 |
5 |
1 |
|
|
||||||
| Total matches |
1,440 |
1,440 |
1,441 |
1,441 |
1,442 |
1,443 |
|
|
||||||
|
Some columns have slightly lower total numbers due to matches with uncultured organisms, which contain no lineage information but were not filtered out in this experiment. |
||||||
|
Podell and Gaasterland Genome Biology 2007 8:R16 doi:10.1186/gb-2007-8-2-r16 |
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