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Open Access Method

Boosting with stumps for predicting transcription start sites

Xiaoyue Zhao, Zhenyu Xuan and Michael Q Zhang*

Author Affiliations

Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, New York 11724, USA

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Genome Biology 2007, 8:R17  doi:10.1186/gb-2007-8-2-r17

Published: 2 February 2007

Additional files

Additional data file 1:

Shown are a comparison between the program based on two binary classifiers and that based on one binary classifier, and a comparison between the program using 0.35 as threshold to define CpG-related or non-CpG-related promoters and that using 0.3 as threshold.

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Open Data