Table 4

Temporal categories of downloaded genomes

Group

Name

Genomes

Sequences

Source


Prokaryota

Archaea

21 archaeal

48625 pep

Cogent241

Bacteria

191 bacterial

568028 pep

Cogent241

Eukaryota

Eukaryota

3 (2 yeast, plasmodium)

16597 pep

Cogent241

Metazoa

Metazoa

3 (2 insect, nematode)

19957 pep

Cogent241

Deuterostomia

Deuterostoma

1 (sea urchin)

527735 nuc

NCBI

Chordata

Urochordata

1 (ciona)

21574 pep

EnsEMBL_v31

Cephalochordata

1 (branchiostoma)

321472 ests

NCBI

Vertebrata

Vertebrata

3 (fish genomes)

93151 pep

EnsEMBL_v32

Mammalia

Mouse

1 (mouse)

23658 pep

EnsEMBL_v31


est, expressed sequence tag; nuc, nucleotide; pep, peptide.

Martinez-Morales et al. Genome Biology 2007 8:R36   doi:10.1186/gb-2007-8-3-r36

Open Data