Table 4 |
||||
|
Temporal categories of downloaded genomes |
||||
|
Group |
Name |
Genomes |
Sequences |
Source |
|
|
||||
|
Prokaryota |
Archaea |
21 archaeal |
48625 pep |
Cogent241 |
|
Bacteria |
191 bacterial |
568028 pep |
Cogent241 |
|
|
Eukaryota |
Eukaryota |
3 (2 yeast, plasmodium) |
16597 pep |
Cogent241 |
|
Metazoa |
Metazoa |
3 (2 insect, nematode) |
19957 pep |
Cogent241 |
|
Deuterostomia |
Deuterostoma |
1 (sea urchin) |
527735 nuc |
NCBI |
|
Chordata |
Urochordata |
1 (ciona) |
21574 pep |
EnsEMBL_v31 |
|
Cephalochordata |
1 (branchiostoma) |
321472 ests |
NCBI |
|
|
Vertebrata |
Vertebrata |
3 (fish genomes) |
93151 pep |
EnsEMBL_v32 |
|
Mammalia |
Mouse |
1 (mouse) |
23658 pep |
EnsEMBL_v31 |
|
|
||||
|
est, expressed sequence tag; nuc, nucleotide; pep, peptide. |
||||
|
Martinez-Morales et al. Genome Biology 2007 8:R36 doi:10.1186/gb-2007-8-3-r36 |
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