Table 1

Sequence in the alignment pipeline


Number of supercontigs
Number of contigs
% of original sequence

Original WGS assembly
33,623
66,800
100%
Original assembly >3 kb
4,123
37,300
92%
Anchored supercontigs
3,678
34,568
88%
Binned supercontigs
2,360
32,641
85%
Reference sequence
374
3,576
N/A

kb, kilobases; WGS, whole-genome shotgun.

Small et al. Genome Biology 2007 8:R41   doi:10.1186/gb-2007-8-3-r41