Table 3 |
|||
|
Assembly statistics |
|||
|
Reference sequence CSAV 2.0 (this work) |
Original WGS assembly |
Non-redundant 1.0 |
|
|
|
|||
|
Total length (Mb) |
174 |
402 |
157 |
|
Scaffold N50 (kb) |
1,779 |
496 |
988 |
|
Contig N50 (kb) |
116 |
17 |
47 |
|
Number of scaffolds |
374 |
33,623 |
446 |
|
Number of scaffolds >3 kb |
374 |
4,123 |
444 |
|
Number of contigs |
4,620 |
66,800 |
8,183 |
|
Gap bases in scaffolds |
1.7% |
5.6% |
4.3% |
|
|
|||
|
kb, kilobases; Mb, megabases; WGS, whole-genome shotgun. |
|||
|
Small et al. Genome Biology 2007 8:R41 doi:10.1186/gb-2007-8-3-r41 |
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