Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
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* Corresponding author: Merete Fredholm mf@kvl.dk
Genome Biology 2007, 8:R45 doi:10.1186/gb-2007-8-4-r45
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Shaolin Wang, Eric Peatman, Jason Abernathy, Geoff Waldbieser, Erika Lindquist, Paul Richardson, Susan Lucas, Mei Wang, Ping Li, Jyothi Thimmapuram, Lei Liu, Deepika Vullaganti, Huseyin Kucuktas, Christopher Murdock, Brian C Small, Melanie Wilson, Hong Liu, Yanliang Jiang, Yoona Lee, Fei Chen, Jianguo Lu, Wenqi Wang, Peng Xu, Benjaporn Somridhivej, Puttharat Baoprasertkul, Jonas Quilang, Zhenxia Sha, Baolong Bao, Yaping Wang, Qun Wang et al. Genome Biology 2010, 11:R8 (22 January 2010) Twelve cDNA libraries from two species of catfish have been sequenced, resulting in the generation of nearly 500,000 ESTs. |
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Mika Zagrobelny, Karsten Scheibye-Alsing, Niels Jensen, Birger Møller, Jan Gorodkin, Søren Bak BMC Genomics 2009, 10:574 (2 December 2009) |
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Association between SNPs within candidate genes and compounds related to boar taint and reproduction Maren Moe, Sigbjørn Lien, Torunn Aasmundstad, Theo HE Meuwissen, Marianne HS Hansen, Christian Bendixen, Eli Grindflek BMC Genetics 2009, 10:32 (5 July 2009) |
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A robust linkage map of the porcine autosomes based on gene-associated SNPs Rikke KK Vingborg, Vivi R Gregersen, Bujie Zhan, Frank Panitz, Anette Høj, Kirsten K Sørensen, Lone B Madsen, Knud Larsen, Henrik Hornshøj, Xuefei Wang, Christian Bendixen BMC Genomics 2009, 10:134 (27 March 2009) |
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Cloning, characterization and expression analysis of porcine microRNAs Alavala Reddy, Yun Zheng, Guru Jagadeeswaran, Simone L Macmil, Wiley B Graham, Bruce A Roe, Udaya Desilva, Weixiong Zhang, Ramanjulu Sunkar BMC Genomics 2009, 10:65 (5 February 2009) |
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Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies Henrik Hornshøj, Emøke Bendixen, Lene N Conley, Pernille K Andersen, Jakob Hedegaard, Frank Panitz, Christian Bendixen BMC Genomics 2009, 10:30 (19 January 2009) |
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Gene expression profiles in liver of pigs with extreme high and low levels of androstenone Maren Moe, Sigbjørn Lien, Christian Bendixen, Jakob Hedegaard, Henrik Hornshøj, Ingunn Berget, Theo HE Meuwissen, Eli Grindflek BMC Veterinary Research 2008, 4:29 (6 August 2008) Levels of the steroid androstenone, a principal component of boar taint, are influenced by genes expressed in the male pig liver regulating phase I oxidation metabolism, phase II conjugation metabolism and steroid availability.
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Camilla S Bruun, Claus B Jørgensen, Lene Bay, Susanna Cirera, Henrik E Jensen, Páll S Leifsson, Jens Nielsen, Knud Christensen, Merete Fredholm BMC Genomics 2008, 9:283 (12 June 2008) |
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Characterization of a newly developed chicken 44K Agilent microarray Xianyao Li, Hsin-I Chiang, James Zhu, Scot E Dowd, Huaijun Zhou BMC Genomics 2008, 9:60 (31 January 2008) |
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Gene expression profiles in testis of pigs with extreme high and low levels of androstenone Maren Moe, Theo Meuwissen, Sigbjørn Lien, Christian Bendixen, Xuefei Wang, Lene Conley, Ingunn Berget, Håvard Tajet, Eli Grindflek BMC Genomics 2007, 8:405 (7 November 2007) |
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Karsten Scheibye-Alsing, Susanna Cirera, Michael J Gilchrist, Merete Fredholm, Jan Gorodkin BMC Genomics 2007, 8:367 (11 October 2007) |
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Lone B Madsen, Bo Thomsen, Knud Larsen, Christian Bendixen, Ida E Holm, Merete Fredholm, Arne L Jørgensen, Anders L Nielsen BMC Neuroscience 2007, 8:72 (13 September 2007) |
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Detection of RNA structures in porcine EST data and related mammals Stefan E Seemann, Michael J Gilchrist, Ivo L Hofacker, Peter F Stadler, Jan Gorodkin BMC Genomics 2007, 8:316 (10 September 2007) |
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Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR Ann-Britt Nygard, Claus B Jørgensen, Susanna Cirera, Merete Fredholm BMC Molecular Biology 2007, 8:67 (15 August 2007) |
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Jakob Hedegaard, Kerstin Skovgaard, Shila Mortensen, Peter Sørensen, Tim K Jensen, Henrik Hornshøj, Christian Bendixen, Peter MH Heegaard Acta Veterinaria Scandinavica 2007, 49:11 (27 April 2007) |