Research
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
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* Corresponding author: Merete Fredholm mf@kvl.dk
1 Division of Genetics and Bioinformatics, IBHV, Grønnegärdsvej 3, The Royal Veterinary and Agricultural University, DK-1870 Frederiksberg C, Denmark
2 Department of Genetics and Biotechnology, Danish Institute of Agricultural Sciences, Blichers Alle, DK-8830 Tjele, Denmark
3 The Wellcome Trust/Cancer Research UK Gurdon Institute, Cambridge, CB2 1QN, UK
4 Beijing Genomics Institute, The Airport Industrial Road, Beijing 101300, PR China
5 Institute of Human Genetics, University of Aarhus, Nordre Ringgade 1, DK-8000 Aarhus C, Denmark
6 Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campus Vej 55, DK-5230 Odense M, Denmark
7 Center for Biological Sequence Analysis, BioCentrum-DTU, Building 208, DK-2800 Lyngby, Denmark
Genome Biology 2007, 8:R45 doi:10.1186/gb-2007-8-4-r45
Published: 2 April 2007Additional files
Additional data file 1:
Additional data file 1 contains figures related to the expression analysis, cleaning and correlations. Furthermore, Additional data file 1 contains tables of noncoding RNA, housekeeping genes and the top 50 cDNA-library-specific genes. Finally, it contains a table of the NCBI trace archive accession numbers.
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Additional data file 2:
Additional data file 2 contains pie charts of how the expression for each cDNA library is distributed in the main level of GO category 'molecular function'.
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Additional data file 3:
Additional data file 3 contains pie charts of how the expression for each cDNA library is distributed in the GO category of 'cellular component'.
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Additional data file 4:
Additional data file 4 contains pie charts of how the expression for each cDNA library is distributed in the GO category of 'biological process'.
Format: PDF Size: 199KB Download file
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