Table 3

Intersection between tissue-specific expression and stress responses

Cluster (analysis of different stress conditions; N0 to N19)

0

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

Clusters (according to tissue specificity)

0

36*

3

53

8

1

38*

0

2

7

4

32*

3

5

4

0

13

2

19*

4

12

1

42*

5

26

9

2

7

0

6

2

3

12

5

12

3

0

28*

2

6

2

23*

2

50*

13

56

14

3

21

0

5

12

9

26*

9

4

11

0

17

0

10

0

19*

3

3

22*

251*

1

0

234*

0

0

2

0

4

1

3

1

243*

2

3

5

336*

5

4

9

4

31

6

18*

30

0

28*

1

9

13

5

4

10

0

16

3

2

0

5

5

110*

11

18

6

0

1

0

2

10

5

56*

16

19

13

0

0

1

26*

0

7

6

13

3

32

2

0

49*

0

0

4

1

10

3

1

2

1

3

3

10

12

3

7

3

1

36

2

0

55*

0

0

0

1

2

0

1

0

10

0

0

4

41*

2

8

21

6

8

7

15*

1

0

3

4

1

10

4

12

9

0

20*

0

8

0

8

9

25

12

21

5

0

4

0

0

5

6

7

11

24*

1

0

0

1

5

0

4

10

13

13

25

3

1

17

0

0

4

1

26*

1

3

2

0

1

0

13

4

4

11

50*

1

15

4

0

7

0

0

3

2

25*

4

4

5

1

1

2

12

0

12

12

2

6

52

3

0

32*

0

0

0

2

3

1

1

3

1

2

0

1

5

3

13

8

26*

94*

3

0

35*

0

0

1

4

11

3

2

2

3

5

3

3

1

1

14

19

1

8

11

1

5

0

7

2

5

16

2

0

4

0

9

0

5

0

11

15

1

15

58

4

0

25

0

0

1

2

3

2

1

0

4

1

0

4

3

2

16

6

10

61

1

0

20

0

0

2

0

3

1

0

2

5

1

2

3

6

0

17

2

3

18

4

0

30

0

0

0

3

0

0

5

0

4

0

1

3

12

1

18

56*

1

5

2

0

1

0

1

4

6

8

5

18

3

0

2

2

4

0

12

Sum

469

156

868

95

41

612

0

54

64

64

267

76

119

75

272

121

25

143

426

134

Shown are numbers of genes at intersections between clusters of tissue-specific expression patterns (T0 to T18) in roots and clusters emerging from the analysis of stress treatments (N0 to N19). *Gene-enriched intersections.

Ma and Bohnert Genome Biology 2007 8:R49   doi:10.1186/gb-2007-8-4-r49