Table 2

Chromosome location and similarity of the SAP and LIP gene families

Gene

Chromosome (nearest neighbor)

BLAST score for nearest neighbor

Most closely related member (BLAST)

BLAST score for most closely related member


SAP gene family

SAP1

6 (SAP4)

2,453

SAP2

3,097

SAP2

R (none)

NA

SAP3

3,529

SAP3

3 (SAP9)

326

SAP2

3,529

SAP4

6 (SAP1)

2,453

SAP6

5,639

SAP5

6 (SAP6)

5,100

SAP6

5,100

SAP6

6 (SAP5)

5,121

SAP4

5,639

SAP7

1 (none)

NA

SAP6

637

SAP8

3 (SAP9)

194

SAP3

1,628

SAP9

3 (SAP8)

194

SAP10

296

SAP10

4 (none)

NA

SAP3

299

LIP gene family

LIP1

1 (LIP10)

2,523

LIP3

3,976

LIP2

1 (LIP1)

2,773

LIP6

3,320

LIP3

1 (LIP6)

2,956

LIP1

3,976

LIP4

6 (none)

NA

LIP8

4,535

LIP5

7 (LIP9)

4,034

LIP8

5,318

LIP6

1 (LIP10)

2,935

LIP2

3,320

LIP7

R (none)

NA

LIP1

838

LIP8

7 (LIP9)

2,076

LIP5

5,174

LIP9

7 (LIP5)

4,084

LIP5

4,084

LIP10

1 (LIP6)

2,935

LIP2

3,211


van het Hoog et al. Genome Biology 2007 8:R52   doi:10.1186/gb-2007-8-4-r52

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