Table 2 |
||||
|
Chromosome location and similarity of the SAP and LIP gene families |
||||
|
Gene |
Chromosome (nearest neighbor) |
BLAST score for nearest neighbor |
Most closely related member (BLAST) |
BLAST score for most closely related member |
|
|
||||
|
SAP gene family |
||||
|
SAP1 |
6 (SAP4) |
2,453 |
SAP2 |
3,097 |
|
SAP2 |
R (none) |
NA |
SAP3 |
3,529 |
|
SAP3 |
3 (SAP9) |
326 |
SAP2 |
3,529 |
|
SAP4 |
6 (SAP1) |
2,453 |
SAP6 |
5,639 |
|
SAP5 |
6 (SAP6) |
5,100 |
SAP6 |
5,100 |
|
SAP6 |
6 (SAP5) |
5,121 |
SAP4 |
5,639 |
|
SAP7 |
1 (none) |
NA |
SAP6 |
637 |
|
SAP8 |
3 (SAP9) |
194 |
SAP3 |
1,628 |
|
SAP9 |
3 (SAP8) |
194 |
SAP10 |
296 |
|
SAP10 |
4 (none) |
NA |
SAP3 |
299 |
|
LIP gene family |
||||
|
LIP1 |
1 (LIP10) |
2,523 |
LIP3 |
3,976 |
|
LIP2 |
1 (LIP1) |
2,773 |
LIP6 |
3,320 |
|
LIP3 |
1 (LIP6) |
2,956 |
LIP1 |
3,976 |
|
LIP4 |
6 (none) |
NA |
LIP8 |
4,535 |
|
LIP5 |
7 (LIP9) |
4,034 |
LIP8 |
5,318 |
|
LIP6 |
1 (LIP10) |
2,935 |
LIP2 |
3,320 |
|
LIP7 |
R (none) |
NA |
LIP1 |
838 |
|
LIP8 |
7 (LIP9) |
2,076 |
LIP5 |
5,174 |
|
LIP9 |
7 (LIP5) |
4,084 |
LIP5 |
4,084 |
|
LIP10 |
1 (LIP6) |
2,935 |
LIP2 |
3,211 |
|
|
||||
|
van het Hoog et al. Genome Biology 2007 8:R52 doi:10.1186/gb-2007-8-4-r52 |
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