|
Tajima relative rate tests of overlapping co-orthologous CNE in Fugu |
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| Gene region* |
No. of overlapping pairs† |
No. of CNE pairs with p > 0.05‡ |
No. of CNE pairs with p ≤ 0.05§ |
% of CNE pairs with p < 0.05¶ |
|
|
|
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| Co-ortholog 1 |
Co-ortholog 2 |
||||
|
|
|||||
| BCL11A |
20 |
15 |
1 |
4 |
25 |
| EBF1 |
7 |
5 |
1 |
1 |
21 |
| FIGN |
28 |
21 |
5 |
2 |
25 |
| PAX2 |
43 |
34 |
4 |
5 |
21 |
| SOX1 |
6 |
5 |
0 |
1 |
17 |
| UNC4.1 |
20 |
15 |
0 |
5 |
25 |
| ZNF503 |
84 |
62 |
5 |
17 |
26 |
|
*Gene region. †Total number of overlapping CNEs within gene region. ‡Numbers of overlapping CNE pairs with no significant difference in substitution rates (that is, p values of > 0.05). §The number of overlapping CNEs that exhibit a significant difference in substitution rate (that is, p value ≤ 0.05) in the CNE sequence in the vicinity of one co-ortholog over that in the other. ¶The percentage of overlapping CNEs with significantly different substitution rates in either co-ortholog as a proportion of the total number of overlapping CNEs. | |||||
Woolfe and Elgar Genome Biology 2007 8:R53 doi:10.1186/gb-2007-8-4-r53 |
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