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Some of the major transcripts from clustering analysis of the microarray data |
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| Transcript |
Description |
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| Cluster 1: highly enriched in sporocysts |
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| TC16551 |
Similar to 90 kDa heat shock protein |
| TC13362 |
Homologue to 40S ribosomal protein S14 |
| TC16641 |
Homologue to elongation factor 1-alpha |
| TC13505 |
Homologue to AUT1 |
| TC10547 |
Homologue to ribosomal protein S8 |
| TC17388 |
Similar to ribosomal protein S15a |
| TC7475 |
Similar to 60S ribosomal protein L8 |
| TC11590 |
Ubiquitin/ribosomal fusion protein |
| TC7403 |
Similar to 60S ribosomal protein L30 |
| TC9217 |
Weakly similar to cathepsin L-like cysteine proteinase |
| TC17720 |
Similar to putative high mobility group-like nuclear protein 2 |
| TC11170 |
Similar to Usmg5 protein |
| Cluster 2: highly enriched in sporocysts and enriched in adults |
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| TC10486 |
Glutathione S-transferase 28 kDa (SM28 antigen) |
| TC11169 |
Similar to Usmg5 protein |
| TC13573 |
23 kDa integral membrane protein (SM23) |
| TC7377 |
Similar to Y-box binding protein |
| TC16738 |
14-3-3 protein homolog 1 |
| TC6863 |
Homologue to 14-3-3 protein homolog 1 |
| TC8189 |
Similar to dynein 8 kDa light chain flagellar outer arm |
| TC13511 |
Homologue to AUT1 |
| TC13698 |
40S rRNA protein homolog |
| TC16537 |
Heat shock 70 kDa homolog protein (HSP70) (major surface antigen |
| TC10528 |
Probable dynein light chain (T-cell-stimulating antigen SM10) |
| TC11430 |
Thioredoxin |
| TC10691 |
Thioredoxin peroxidase |
| TC16806 |
Similar to NADH dehydrogenase 6 |
| TC7615 |
Similar to ATP synthase lipid-binding protein-like protein |
| TC11552 |
Homologue to cytochrome b |
| Cluster 3: highly enriched in sporocysts and enriched in cercariae |
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| TC13775 |
Antigen SM21.7 |
| TC13518 |
Homologue to NADH dehydrogenase subunit |
| TC17477 |
Homologue to NADH dehydrogenase subunit 2 |
| TC17193 |
Similar to NADH dehydrogenase subunit 4 |
| TC13722 |
Homologue to NADH dehydrogenase subunit 5 |
| TC16807 |
Homologue to NADH dehydrogenase 6 |
| TC7310 |
Homologue to cytochrome c oxidase subunit 1 |
| TC14303 |
Homologue to ATPase subunit 6 |
| TC16782 |
Enolase |
| TC16557 |
Myosin heavy chain - fluke |
| TC10480 |
Elastase |
| TC8910 |
Tubulin beta-2 chain. |
| TC17016 |
Stathmin-like protein |
| TC7850 |
Similar to actin-filament fragmenting protein |
| TC7158 |
Similar to fibrillarin |
| Cluster 4: highly enriched in sporocysts and cercariae |
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| TC13565 |
Myosin light chain |
| TC16878 |
Similar to glycerol-3-phosphate dehydrogenase [NAD+] cytoplasmic |
| TC17004 |
Homologue to cytochrome c |
| TC16870 |
ATP:guanidino kinase SMC74 (EC 2.7.3.-; ATP:guanidino phosphotransferase) |
| TC17192 |
Homologue to NADH dehydrogenase subunit 4 |
| Cluster 5: enriched in sporocysts and highly enriched in adults |
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| TC16575 |
Major egg antigen |
| TC8654 |
Similar to anti-Mullerian hormone type II receptor precursor |
| TC13882 |
Similar to 26S proteasome regulatory subunit |
| Cluster 6: highly enriched in adults |
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| TC10493 |
Cathepsin B1 isotype 1 |
| TC13457 |
Eggshell protein precursor |
| TC13487 |
Homologue to eggshell protein precursor |
| TC13492 |
Homologue to eggshell precursor protein |
| TC8804 |
Weakly similar to retinoid X receptor RXR-2 |
| TC12198 |
Similar to mucin-like protein |
| TC7011 |
Similar to putative retroelement |
| TC16781 |
Extracellular superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1; EC-SOD) |
| TC10637 |
Weakly similar to aquaporin 9 (small solute channel 1) |
| TC9163 |
Similar to serine/threonine-protein kinase unc-51 (EC 2.7.1.-; (uncoordinated protein 5) |
| TC7005 |
Similar to putative senescence-associated protein |
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Transcripts enriched in specific schistosome stages are organized into six major clusters. For an updated list of the latest version of TC sequences see Additional data file 8. | |
Jolly et al. Genome Biology 2007 8:R65 doi:10.1186/gb-2007-8-4-r65 |
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