Table 5

Examples of prediction for multi-localized sequences

Name

Correct

MLCS

CYT

END

GOL

CSK

LYS

MIT

NUC

PLA

EXC

POX

TAU_MACMU

CYT/PLA

98.2

49.1^a

0.2

0.1

0.1

0.0

0.3

0.6

49.2^a

0.3

0.1

CTNB1_MOUSE

CYT/NUC

85.1

49.8^a

0.1

0.0

0.0

0.0

0.1

42.2^a

7.5

0.2

0.0

3BHS2_RAT

END/MIT

97.9

0.4

48.9^a

0.2

0.1

0.0

49.1^a

0.3

0.4

0.4

0.1

SIA4A_CHICK

GOL/EXC

85.0

2.4

1.8

42.4^a

0.6

0.0

1.8

2.5

4.6

43.7^a

0.2

GGH_HUMAN

LYS/EXC

69.1

4.4

3.1

2.1

2.0

33.7^a

3.2

5.9

5.4

39.9^a

0.3

This table presents examples of multi-localized sequences predicted with a high multi-localized confidence score (MLCS) value. The 'name' column represents Swiss-Prot entry names. The 'correct' column shows both organelles in which the sequence is localized into. The remaining columns show the confidence score for each possible localization. CSK, cytoskeleton; CYT, cytoplasm; END, endoplasmic reticulum; EXC, extracellular; GOL, golgi; LYS, lysosome; MIT, mitochondria; NUC, nucleus; PLA, plasma membrane; POX, perixosome. ^aThese indicate the two correct localizations for each sequence.

King and Guda Genome Biology 2007 8:R68   doi:10.1186/gb-2007-8-5-r68