Table 5

Examples of prediction for multi-localized sequences

Name
Correct
MLCS
CYT
END
GOL
CSK
LYS
MIT
NUC
PLA
EXC
POX

TAU_MACMU
CYT/PLA
98.2
49.1a
0.2
0.1
0.1
0.0
0.3
0.6
49.2a
0.3
0.1
CTNB1_MOUSE
CYT/NUC
85.1
49.8a
0.1
0.0
0.0
0.0
0.1
42.2a
7.5
0.2
0.0
3BHS2_RAT
END/MIT
97.9
0.4
48.9a
0.2
0.1
0.0
49.1a
0.3
0.4
0.4
0.1
SIA4A_CHICK
GOL/EXC
85.0
2.4
1.8
42.4a
0.6
0.0
1.8
2.5
4.6
43.7a
0.2
GGH_HUMAN
LYS/EXC
69.1
4.4
3.1
2.1
2.0
33.7a
3.2
5.9
5.4
39.9a
0.3

This table presents examples of multi-localized sequences predicted with a high multi-localized confidence score (MLCS) value. The 'name' column represents Swiss-Prot entry names. The 'correct' column shows both organelles in which the sequence is localized into. The remaining columns show the confidence score for each possible localization. CSK, cytoskeleton; CYT, cytoplasm; END, endoplasmic reticulum; EXC, extracellular; GOL, golgi; LYS, lysosome; MIT, mitochondria; NUC, nucleus; PLA, plasma membrane; POX, perixosome. aThese indicate the two correct localizations for each sequence.

King and Guda Genome Biology 2007 8:R68   doi:10.1186/gb-2007-8-5-r68