Table 8

A matrix showing estimated fractions of subcellular proteomes on the human proteome

Location

CYT

CSK

END

EXC

GOL

LYS

MIT

NUC

PLA

POX


CYT

14.14a

CSK

0.64

1.48a

0.01

END

0.10

3.04a

EXC

0.22

0.01

0.04

11.71a

GOL

0.29

0.03

0.31

0.17

1.56a

LYS

0.02

0.03

< 0.01

0.67a

MIT

0.31

0.07

0.02

< 0.01

4.80a

NUC

4.74

0.07

0.09

0.12

0.01

0.09

28.38a

PLA

0.77

0.02

0.14

0.94

0.09

0.00

0.03

0.19

24.08a

POX

0.05

< 0.01

0.03

0.46a


This chart shows the percentages of the proteome estimated to localize over 10 different organelles. aThese cells represent the percentage of sequences predicted to single-localize; all other cells represent multi-localized sequences. The values are based on a CSthresh of 15 and MLCSthresh of 60. CSK, cytoskeleton; CYT, cytoplasm; END, endoplasmic reticulum; EXC, extracellular; GOL, golgi; LYS, lysosome; MIT, mitochondria; NUC, nucleus; PLA, plasma membrane; POX, perixosome.

King and Guda Genome Biology 2007 8:R68   doi:10.1186/gb-2007-8-5-r68

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