cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers

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Thomas Brody¹ , Wayne Rasband² , Kevin Baler² , Alexander Kuzin¹ , Mukta Kundu¹ and Ward F Odenwald¹

¹Neural Cell-Fate Determinants Section, NINDS, NIH, Bethesda, MD, 20892, USA

²Office of Scientific Director, IRP, NIMH, NIH, Bethesda, MD, 20892, USA

author email corresponding author email

Genome Biology 2007, 8:R75doi:10.1186/gb-2007-8-5-r75


Published:	9 May 2007

Subject areas: Bioinformatics, Molecular biology, Genome studies

Additional data file 1:

cDT-cataloger analysis of the murine Delta-like 1 Homology-II and msd-II enhancers supplemental to Figure 4

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Additional data file 2:

cis-Decoder analysis of the Drosophila hairy stripe 1 enhancer

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Additional data file 3:

cis-Decoder analysis of the human TIP39 5' proximal promoter

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Additional data file 4:

Contribution of each Drosophila and mammalian enhancer to the specific cDT-libraries generated in this study

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